[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 214 items for (author: yang & dh)

EMDB-41816:
Cryo-EM structure of the RAF1-HSP90-CDC37 complex in the closed state
Method: single particle / : Finci LI, Simanshu DK

EMDB-41817:
Cryo-EM structure of the HSP90 dimer (NTD-MD) in the semi-open state
Method: single particle / : Finci LI, Simanshu DK

EMDB-41818:
Cryo-EM structure of the cross-linked HSP90 dimer (NTD-MD) in the semi-open state
Method: single particle / : Finci LI, Simanshu DK

PDB-8u1l:
Cryo-EM structure of the RAF1-HSP90-CDC37 complex in the closed state
Method: single particle / : Finci LI, Simanshu DK

PDB-8u1m:
Cryo-EM structure of the HSP90 dimer (NTD-MD) in the semi-open state
Method: single particle / : Finci LI, Simanshu DK

PDB-8u1n:
Cryo-EM structure of the cross-linked HSP90 dimer (NTD-MD) in the semi-open state
Method: single particle / : Finci LI, Simanshu DK

EMDB-37390:
Cryo-EM structure of peptide free and Gs-coupled GIPR
Method: single particle / : Cong ZT, Zhao FH, Li Y, Luo G, Zhou QT, Yang DH, Wang MW, Dai AT, Shen DD, Zhang Y, Xia T, Stevens RC, Xu HE, Zhao LH

EMDB-37504:
Cryo-EM structures of peptide free and Gs-coupled GLP-1R
Method: single particle / : Cong ZT, Zhao FH, Li Y, Luo G, Zhou QT, Yang DH, Wang MW

EMDB-37505:
Cryo-EM structures of peptide free and Gs-coupled GCGR
Method: single particle / : Cong ZT, Zhao FH, Li Y, Luo G, Zhou QT, Yang DH, Wang MW

EMDB-36326:
Cryo-EM structure of the GLP-1R/GCGR dual agonist peptide15-bound human GLP-1R-Gs complex
Method: single particle / : Yang L, Zhou QT, Dai AT, Zhao FH, Chang RL, Ying TL, Wu BL, Yang DH, Wang MW, Cong ZT

EMDB-27031:
Accurate computational design of genetically encoded 3D protein crystals
Method: single particle / : Li Z, Borst AJ, Baker D

EMDB-40926:
CryoEM Structure of Computationally Designed Nanocage O32-ZL4
Method: single particle / : Weidle C, Borst A

PDB-8cwy:
Accurate computational design of genetically encoded 3D protein crystals
Method: single particle / : Li Z, Borst AJ, Baker D

PDB-8szz:
CryoEM Structure of Computationally Designed Nanocage O32-ZL4
Method: single particle / : Weidle C, Borst A

EMDB-35706:
Cryo-EM structure of GIPR splice variant 1 (SV1) in complex with Gs protein
Method: single particle / : Zhao FH, Hang KN, Zhou QT, Shao LJ, Li H, Li WZ, Lin S, Dai AT, Cai XQ, Liu YY, Xu YN, Feng WB, Yang DH, Wang MW

EMDB-35707:
Cryo-EM structure of GIPR splice variant 2 (SV2) in complex with Gs protein
Method: single particle / : Zhao FH, Hang KN, Zhou QT, Shao LJ, Li H, Li WZ, Lin S, Dai AT, Cai XQ, Liu YY, Xu YN, Feng WB, Yang DH, Wang MW

EMDB-35601:
Cryo-EM structure of the alpha-MSH-bound human melanocortin receptor 5 (MC5R)-Gs complex
Method: single particle / : Feng WB, Zhou QT, Chen XY, Dai AT, Cai XQ, Liu X, Zhao FH, Chen Y, Ye CY, Xu YN, Cong ZT, Li H, Lin S, Yang DH, Wang MW

EMDB-35616:
Cryo-EM structure of the PG-901-bound human melanocortin receptor 5 (MC5R)-Gs complex
Method: single particle / : Feng WB, Zhou QT, Chen XY, Dai AT, Cai XQ, Liu X, Zhao FH, Chen Y, Ye CY, Xu YN, Cong ZT, Li H, Lin S, Yang DH, Wang MW

EMDB-36324:
Cryo-EM structure of the GLP-1R/GCGR dual agonist Peptide 15-bound human GCGR-Gs complex
Method: single particle / : Yang L, Zhou QT, Dai AT, Zhao FH, Chang RL, Ying TL, Wu BL, Yang DH, Wang MW, Cong ZT

EMDB-36328:
Cryo-EM structure of the GLP-1R/GCGR dual agonist SAR425899-bound human GCGR-Gs complex
Method: single particle / : Yang L, Zhou QT, Dai AT, Zhao FH, Chang RL, Ying TL, Wu BL, Yang DH, Wang MW, Cong ZT

EMDB-36323:
Cryo-EM structure of the GLP-1R/GCGR dual agonist MEDI0382-bound human GLP-1R-Gs complex
Method: single particle / : Yang L, Zhou QT, Dai AT, Zhao FH, Chang RL, Ying TL, Wu BL, Yang DH, Wang MW, Cong ZT

EMDB-36325:
Cryo-EM structure of the GLP-1R/GCGR dual agonist SAR425899-bound human GLP-1R-Gs complex
Method: single particle / : Yang L, Zhou QT, Dai AT, Zhao FH, Chang RL, Ying TL, Wu BL, Yang DH, Wang MW, Cong ZT

EMDB-36327:
Cryo-EM structure of the GLP-1R/GCGR dual agonist MEDI0382-bound human GCGR-Gs complex
Method: single particle / : Yang L, Zhou QT, Dai AT, Zhao FH, Chang RL, Ying TL, Wu BL, Yang DH, Wang MW, Cong ZT

EMDB-29307:
Structure of WT HIV-1 intasome bound to Dolutegravir
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

EMDB-29309:
Structure of E138K HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

EMDB-29312:
Structure of E138K HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

EMDB-29313:
Structure of Q148K HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

EMDB-29315:
Structure of E138K/G140A HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

EMDB-29317:
Structure of E138K/Q148K HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

EMDB-29318:
Structure of G140A/Q148K HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

EMDB-29319:
Structure of E138K/G140A/Q148K HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

EMDB-29320:
Structure of E138K/G140A/Q148R HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

EMDB-29321:
Structure of E138K/G140S/Q148H HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

EMDB-29322:
Structure of E138K/G140A/Q148K HIV-1 intasome with 4d bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

PDB-8fn7:
Structure of WT HIV-1 intasome bound to Dolutegravir
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

PDB-8fnd:
Structure of E138K HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

PDB-8fng:
Structure of E138K HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

PDB-8fnh:
Structure of Q148K HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

PDB-8fnj:
Structure of E138K/G140A HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

PDB-8fnl:
Structure of E138K/Q148K HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

PDB-8fnm:
Structure of G140A/Q148K HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

PDB-8fnn:
Structure of E138K/G140A/Q148K HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

PDB-8fno:
Structure of E138K/G140A/Q148R HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

PDB-8fnp:
Structure of E138K/G140S/Q148H HIV-1 intasome with Dolutegravir bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

PDB-8fnq:
Structure of E138K/G140A/Q148K HIV-1 intasome with 4d bound
Method: single particle / : Shan ZL, Passos DO, Strutzenberg TS, Li M, Lyumkis D

EMDB-27500:
EBNA1 DNA binding domain (DBD) (458-617)+2 repeats of family repeat (FR) region
Method: single particle / : Mei Y, Lieberman PM, Murakami K

PDB-8dlf:
EBNA1 DNA binding domain (DBD) (458-617)+2 repeats of family repeat (FR) region
Method: single particle / : Mei Y, Lieberman PM, Murakami K

EMDB-35096:
The in situ structure of conoid fiber from Toxoplasma gondii tachyzoite
Method: subtomogram averaging / : Li Z, Guo Q

EMDB-35097:
Tomogram of apical part of Toxoplasma gondii tachyzoite
Method: electron tomography / : Li Z, Guo Q

EMDB-35098:
Tomogram of daughter buds in mature Toxoplasma gondii tachyzoite
Method: electron tomography / : Li Z, Guo Q

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more